Master Thesis - Structural and functional characterization of alphavirus – receptor interactions
Prof. Dr. Dietmar Manstein, PD Dr. Roman Fedorov, Prof. Dr. Gisa Gerold
The research groups “Macromolecular Mechanisms” and “Molecular and Cellular Infectiology” at the Hannover Medical School (MHH) and the Research Center for Emerging Infections and Zoonosis (RIZ), University of Veterinary Medicine in Hannover, Germany, are recruiting a Master student in biochemistry to pursue a project aiming at elucidating and characterizing protein complexes relevant for alphavirus entry into human cells.
Alphaviruses are enveloped RNA viruses, which reside in animal reservoirs and cause arthritis or encephalitis in humans after transmission by mosquitoes. Among the re-emerging alphaviruses is Venezuelan equine encephalitis virus (VEEV), which causes neurological symptoms in humans and horses. Recently, LDLRAD3 was identified as a receptor for VEEV in humans (Ma et al. ,Nature, 2020). The nature of the interaction between the viral envelope proteins and the LDLRAD3 molecule remains elusive to date.The planned project aims at generating expression systems for the ectodomains of the VEEV glycoproteins and the LDLRAD3 receptor from humans and horses. The ectodomains will subsequently be purified and characterized biophysically (e.g. by microscale thermophoresis, dynamic light scattering, native gel electrophoresis, isothermal titration calorimetry). To assess the biological activity of the ectodomains, competition assays will be performed, i.e. we will assess if the ectodomains can block VEEV cell entry in readily available infection
assays (at RIZ). Ultimately, the protein complex of virus envelope and receptor ectodomains will be used for crystallization screens with the goal of resolving the structure and interfaces of the protein complex. In addition, structural modeling tools will be applied to predict the tertiary protein complex structure (at MHH). This work will help understand how an important re-emerging pathogen enters human cells and whether similar mechanisms apply for other host species such as horses.
You will be responsible for carrying out research in the Federov and Gerold research groups (AG Fedorov, AG Gerold) at MHH and RIZ. You will learn and apply expression construct design, protein expression techniques (in insect and mammalian cells), cell culture techniques, immunoblotting, virus infection assays (BSL2), biophysical analyses and protein crystallization techniques. You will work closely with researchers in both laboratories and actively participate in institute seminars.
The full advertisement for the position can be found here.
with the following documents:
1. short 1-page CV
2. Copy of BSc certificate
3. Copy of high school certificate